encode-database
@jaechang-hits · 收录于 1 周前
ENCODE Portal REST API for regulatory genomics: TF ChIP-seq, ATAC-seq/DNase-seq peaks, histone marks, and RNA-seq across 1000+ cell types. Search experiments by assay/biosample/target; download BED/bigWig; retrieve SCREEN cCREs by region or gene. Use to annotate variants with regulatory tracks, find open chromatin in a cell type, or fetch peak files for ChIP/ATAC analysis. For regulatory variant scoring use regulomedb-database; for GWAS associations use gwas-database.
适合你,如果需要用公共调控基因组数据注释变异或分析染色质状态。
/ 通过 npx 安装 校验哈希
npx oh-my-skill add jaechang-hits/sciagent-skills/encode-database/ 通过 bash 安装
curl -fsSL https://oh-my-skill.com/install.sh | bash -s -- jaechang-hits/sciagent-skills/encode-database/ 已经装过?验证本机副本,不用重装
npx oh-my-skill verify jaechang-hits/sciagent-skills/encode-database安装目标可用 --agent / --scope 或 --to 明确指定;省略时只会在唯一已存在的 agent 目录上自动选择,零命中或多命中会停止并提示。content_hash 缺失或不一致均拒装。
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