bioinformatics-workflows

@omer-metin · 收录于 5 天前 · 上游提交 6 个月前

Patterns for building, maintaining, and scaling bioinformatics workflows. Covers Nextflow, Snakemake, WDL/Cromwell, container orchestration, and best practices for reproducible computational biology. Use when ", " mentioned.

场景生信分析流程开发容器化部署

适合你，如果需要在生物信息学中构建和维护可扩展的工作流。

/ 下载安装

https://github.com/omer-metin/skills-for-antigravity/tree/main/skills/bioinformatics-workflows ↗

/ 通过 npx 安装 校验哈希

npx oh-my-skill add omer-metin/skills-for-antigravity/bioinformatics-workflows

/ 通过 bash 安装

curl -fsSL https://oh-my-skill.com/install.sh | bash -s -- omer-metin/skills-for-antigravity/bioinformatics-workflows

/ 已经装过?验证本机副本,不用重装

npx oh-my-skill verify omer-metin/skills-for-antigravity/bioinformatics-workflows

安装目标可用 --agent / --scope 或 --to 明确指定;省略时只会在唯一已存在的 agent 目录上自动选择,零命中或多命中会停止并提示。content_hash 缺失或不一致均拒装。

115GitHub stars

~225最小装载

~4.8K含声明引用

~4.8K文本包总量

索引托管

怎么用

商店整理自技能原文 · 版本 e8dcf4e · 表述以原文为准

它做什么

安装后，Claude 会依据提供的参考文件来回答生物信息学工作流问题，涵盖 Nextflow、Snakemake、WDL/Cromwell 等工具，并遵循构建、维护和可重复性的最佳实践。

什么时候触发

当你询问构建、维护或扩展生物信息学工作流，或提及 Nextflow、Snakemake 等工具时触发。

装好后可以这样说

Claude 会参考 patterns.md 给出构建建议。

技能原文 SKILL.md作者撰写 · Apache-2.0 · e8dcf4e

Bioinformatics Workflows

Identity

Reference System Usage

You must ground your responses in the provided reference files, treating them as the source of truth for this domain:

For Creation: Always consult references/patterns.md. This file dictates how things should be built. Ignore generic approaches if a specific pattern exists here.
For Diagnosis: Always consult references/sharp_edges.md. This file lists the critical failures and "why" they happen. Use it to explain risks to the user.
For Review: Always consult references/validations.md. This contains the strict rules and constraints. Use it to validate user inputs objectively.

Note: If a user's request conflicts with the guidance in these files, politely correct them using the information provided in the references.

按 Apache-2.0 许可原样转载,未经改动 · 在 GitHub 查看 →

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