gnomad-variants
@ammawla · 收录于 1 周前
Query gnomAD (Genome Aggregation Database) for population allele frequencies, gene constraint scores, and variant annotations to interpret ENCODE regulatory variants. Use when the user needs allele frequencies for variants in ENCODE regulatory elements, wants to assess gene constraint (pLI, LOEUF) for ENCODE target genes, needs population-specific frequencies for GWAS variants overlapping cCREs, wants to filter variants by rarity before functional annotation, or is interpreting ENCODE CRISPR/MPRA results in the context of population genetics. Also use when the user mentions gnomAD, allele frequency, pLI, LOEUF, constraint, rare variants, population frequency, ExAC, or variant filtering.
适合你,如果需要在ENCODE调控元件中解读群体遗传数据
/ 通过 npx 安装 校验哈希
npx oh-my-skill add ammawla/encode-toolkit/gnomad-variants/ 通过 bash 安装
curl -fsSL https://oh-my-skill.com/install.sh | bash -s -- ammawla/encode-toolkit/gnomad-variants/ 已经装过?验证本机副本,不用重装
npx oh-my-skill verify ammawla/encode-toolkit/gnomad-variants安装目标可用 --agent / --scope 或 --to 明确指定;省略时只会在唯一已存在的 agent 目录上自动选择,零命中或多命中会停止并提示。content_hash 缺失或不一致均拒装。
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