hic-aggregation
@ammawla · 收录于 1 周前
Build comprehensive chromatin contact maps by aggregating Hi-C loop calls (BEDPE) across multiple ENCODE experiments, donors, and labs. Use when the user wants to answer "what regions are in 3D contact in my tissue?" by creating a union catalog of chromatin loops. Handles resolution-aware anchor matching, cross-lab variation, and Hi-C-specific quality metrics.
适合你,如果正在研究三维基因组,需要整合多个Hi-C实验的染色质环数据。
/ 通过 npx 安装 校验哈希
npx oh-my-skill add ammawla/encode-toolkit/hic-aggregation/ 通过 bash 安装
curl -fsSL https://oh-my-skill.com/install.sh | bash -s -- ammawla/encode-toolkit/hic-aggregation/ 已经装过?验证本机副本,不用重装
npx oh-my-skill verify ammawla/encode-toolkit/hic-aggregation安装目标可用 --agent / --scope 或 --to 明确指定;省略时只会在唯一已存在的 agent 目录上自动选择,零命中或多命中会停止并提示。content_hash 缺失或不一致均拒装。
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